Update on this system...
Dad has disassembled the entire thing and given it to me as a Christmas present
I have thoroughly scrubbed the growbed and the insides of the pipes (fun job.... not!). The fish tank will be fitted with a new liner as it is now an in-ground fish tank (aka pond).
A thought struck me as I was shopping for pipe fittings --- glue. I have read on the other parts of the forum that blue PVC cement is okay, but I wonder why only one brand of silicon glue is labelled "aquarium safe"? Makes me think that the choice of glue in this closed-loop system could be critical.
Notwithstanding all of the errors in management that account for a large number of fish losses in Dad's setup, I do wonder if we also produced a toxic combination of glues when setting up that system that accounts for both the poor plant growth and the difficulty in keeping fish alive. From memory, for all PVC joins we used a red cement (not even thinking about whether it's poisonous), and some unknown non-clear silicon sealant to fit the drain to the GB. I cannot remember if we flushed the system or just filled it up... Yikes, we could have been cycling nasty chemicals from the word "go"...
Anyway, as a precaution I've bought some aquarium-safe clear silicon sealant and cut out any fittings that had either type of glue (including ripping the drain out of the growbed). I will also flush the new system before adding fish!